Search results for "Reticulate evolution"

showing 7 items of 7 documents

Introgression of mitochondrial DNA among Myodes voles: consequences for energetics?

2011

Abstract Background Introgression of mitochondrial DNA (mtDNA) is among the most frequently described cases of reticulate evolution. The tendency of mtDNA to cross interspecific barriers is somewhat counter-intuitive considering the key function of enzymes that it encodes in the oxidative-phosphorylation process, which could give rise to hybrid dysfunction. How mtDNA reticulation affects the evolution of metabolic functions is, however, uncertain. Here we investigated how morpho-physiological traits vary in natural populations of a common rodent (the bank vole, Myodes glareolus) and whether this variation could be associated with mtDNA introgression. First, we confirmed that M. glareolus ha…

0106 biological sciencesMaleMitochondrial DNANuclear geneEvolutionIntrogression010603 evolutionary biology01 natural sciencesDNA Mitochondrial03 medical and health sciencesQH359-425AnimalsEcology Evolution Behavior and Systematics030304 developmental biologyGeneticsCell Nucleus0303 health sciencesbiologyCytochrome bArctic RegionsArvicolinaebiology.organism_classificationReticulate evolutionNuclear DNABank volePhenotypeArvicolinaeFemaleBasal MetabolismResearch ArticleBMC evolutionary biology
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Mitochondrial introgression suggests extensive ancestral hybridization events among Saccharomyces species.

2017

Horizontal gene transfer (HGT) in eukaryotic plastids and mitochondrial genomes is common, and plays an important role in organism evolution. In yeasts, recent mitochondrial HGT has been suggested between S. cerevisiae and S. paradoxus. However, few strains have been explored given the lack of accurate mitochondrial genome annotations. Mitochondrial genome sequences are important to understand how frequent these introgressions occur, and their role in cytonuclear incompatibilities and fitness. Indeed, most of the Bateson-Dobzhansky-Muller genetic incompatibilities described in yeasts are driven by cytonuclear incompatibilities. We herein explored the mitochondrial inheritance of several wor…

0301 basic medicineMitochondrial DNAParadoxusGenomeSaccharomycesHoming endonucleaseElectron Transport Complex IV03 medical and health sciencesOpen Reading FramesSaccharomycesSpecies SpecificityGeneticsMolecular BiologyGeneEcology Evolution Behavior and SystematicsPhylogenybiologyBase SequenceGeographybiology.organism_classificationReticulate evolutionMitochondria030104 developmental biologyHaplotypesEvolutionary biologyHorizontal gene transferGenome Mitochondrialbiology.proteinHybridization GeneticSaccharomyces reticulate evolution mitochondrial introgression selfish elements recombination interspecies hybridizationSequence AlignmentMolecular phylogenetics and evolution
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Study of the Evolutionary Relationships among Limonium Species (Plumbaginaceae) Using Nuclear and Cytoplasmic Molecular Markers

2000

The genus Limonium, due to the patchiness of the natural habitats of its species as well as the high frequency of hybridization and polyploidy and the possibility of reproduction by apomixis, provides an example of all the principal mechanisms of rapid speciation of plants. As an initial study of evolution in this genus, we have analyzed intra- and interspecific variability in 17 species from section Limonium, the largest in the genus, based on RFLPs of cpDNA and nuclear rDNA ITS sequences. In the cpDNA analysis, 21 restriction enzymes were used, resulting in 779 fragments, 490 of which were variable and 339 parsimony informative. L. furfuraceum exhibited two relatively divergent cpDNA hapl…

CytoplasmChloroplastsLimoniumMolecular Sequence DataBiologyDNA RibosomalPhylogeneticsSequence Homology Nucleic AcidApomixisPolyphylyBotanyGeneticsMolecular BiologyPhylogenyPlant Physiological PhenomenaEcology Evolution Behavior and SystematicsCell NucleusBase SequencePhylogenetic treeMediterranean RegionReproductionGenetic VariationPlantsbiology.organism_classificationBiological EvolutionReticulate evolutionChloroplast DNARestriction fragment length polymorphismPolymorphism Restriction Fragment LengthMolecular Phylogenetics and Evolution
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Phylogenetics of Anthyllis (Leguminosae: Papilionoideae: Loteae): Partial incongruence between nuclear and plastid markers, a long branch problem and…

2010

Abstract Phylogenetic relationships in the genus Anthyllis (Leguminosae: Papilionoideae: Loteae) were investigated using data from the nuclear ribosomal internal transcribed spacer regions (ITS) and three plastid regions (psbA–trnH intergenic spacer, petB–petD region and rps16 intron). Bayesian and maximum parsimony (MP) analysis of a concatenated plastid dataset recovered well-resolved trees that are topologically similar, with many clades supported by unique indels. MP and Bayesian analyses of the ITS sequence data recovered trees that have several well-supported topological differences, both among analyses, and to trees inferred from the plastid data. The most substantial of these concer…

Genetic SpeciationMolecular Sequence DataAnthyllisMonophylyBotanyDNA Ribosomal SpacerGeneticsPlastidsInternal transcribed spacerMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyCell NucleusLikelihood FunctionsbiologyPhylogenetic treeBase SequenceModels GeneticDNA ChloroplastBayes TheoremFabaceaeSequence Analysis DNAbiology.organism_classificationBiological EvolutionReticulate evolutionIntronsMaximum parsimonyLoteaeMolecular phylogeneticsPollenSequence AlignmentMolecular phylogenetics and evolution
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Reticulation or divergence: the origin of a rare serpentine endemic assessed with chloroplast, nuclear and RAPD markers

2002

Species of Armeria from the southern part of the Iberian Peninsula have been postulated to undergo extensive reticulate evolution based on ITS sequences as well as morphometric, eco-geographical evidence and crossing experiments. The hypothesis that a rare serpentine endemic (A. villosa subsp. carratracensis) originated from a cross between another serpentine tolerant endemic (A. colorata) and a widespread limestone species (A. villosa subsp. longiaristata) is tested with molecular markers. Sequences from two chloroplast regions [trnL (UAA)-trnF (GAA) and trnD (GUC)-trnT (GGU)], from nuclear ribosomal DNA (ITS-1 + 5.8S + ITS-2) as well as RAPD data are used. Variation in chloroplast and nuc…

GeneticsTaxonReticulateChloroplast DNAbiologyUPGMAArmeriaPlant Sciencebiology.organism_classificationRibosomal DNAEcology Evolution Behavior and SystematicsReticulate evolutionRAPDPlant Systematics and Evolution
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Testing reticulate versus coalescent origins of Erica lusitanica using a species phylogeny of the northern heathers (Ericeae, Ericaceae).

2015

Whilst most of the immense species richness of heathers (Calluna, Daboecia and Erica: Ericeae; Ericaceae) is endemic to Africa, particularly the Cape Floristic Region, the oldest lineages are found in the Northern Hemisphere. We present phylogenetic hypotheses for the major clades of Ericeae represented by multiple accessions of all northern Erica species and placeholder taxa for the large nested African/Madagascan clade. We identified consistent, strongly supported conflict between gene trees inferred from ITS and chloroplast DNA sequences with regard to the position of Erica lusitanica. We used coalescent simulations to test whether this conflict could be explained by coalescent stochasti…

Phylogenetic treebiologyEcologyDNA ChloroplastSequence Analysis DNAAfrica Easternbiology.organism_classificationBiological EvolutionDaboeciaReticulate evolutionCoalescent theoryEuropePhylogeographyErica lusitanicaAfricaGeneticsBiological dispersalHybridization GeneticEricaceaeSpecies richnessCladeMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyMolecular phylogenetics and evolution
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Population structure and reticulate evolution of Saccharomyces eubayanus and its lager-brewing hybrids

2014

Reticulate evolution can be a major driver of diversification into new niches, especially in disturbed habitats and at the edges of ranges. Industrial fermentation strains of yeast provide a window into these processes, but progress has been hampered by a limited understanding of the natural diversity and distribution of Saccharomyces species and populations. For example, lager beer is brewed with Saccharomyces pastorianus, an alloploid hybrid of S. cerevisiae and S. eubayanus, a species only recently discovered in Patagonia, Argentina. Here, we report that genetically diverse strains of S. eubayanus are readily isolated from Patagonia, demonstrating that the species is well established the…

PopulationMolecular Sequence DataArgentinaBiologyNucleotide diversityCiencias BiológicasSaccharomycesWisconsinBiología Celular MicrobiologíaPhylogeneticsDCR1PatagoniaGeneticseducationDNA FungalMycological Typing TechniquesEcology Evolution Behavior and SystematicsPhylogenyGenetic diversityeducation.field_of_studyPhylogenetic treeEcologyChimeragenetic rootsSaccharomyces eubayanusBeerGenetic VariationBayes TheoremHibridacióSaccharomyces pastorianusbiology.organism_classificationBiological EvolutionReticulate evolutionGenetics PopulationEvolutionary biologyHybridization Genetichuman activitiesCIENCIAS NATURALES Y EXACTASMLSTMultilocus Sequence Typing
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